Last year I wrote two posts about resources for Philippines genealogy, Online resources and Offline resources. Since then, the record search pilot of the LDS that I mentioned has ended, and the records are now available through the FamilySearch website.
The LDS also added a new record collection to FamilySearch: scans of the Manila Civil Registration (1899-1994).
I created a new, up to date, page on my site, Resources for genealogy in the Philippines, with all the online and offline resources that I know about. Let me know if I missed anything!